Nucleic Acids Research Advance Access published online on December 5, 2006
Nucleic Acids Research, doi:10.1093/nar/gkl913
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Database Issue |
EMBL Nucleotide Sequence Database in 2006
EMBL Outstation—European Bioinformatics Institute, Wellcome Trust Genome Campus Hinxton, Cambridge, CB10 1SD, UK
*To whom correspondence should be addressed. Tel: +44 01223 494463; Fax: +44 1223 494468; Email: kulikova{at}ebi.ac.uk
Received September 15, 2006. Revised October 16, 2006. Accepted October 16, 2006.
The EMBL Nucleotide Sequence Database (http://www.ebi.ac.uk/embl) at the EMBL European Bioinformatics Institute, UK, offers a large and freely accessible collection of nucleotide sequences and accompanying annotation. The database is maintained in collaboration with DDBJ and GenBank. Data are exchanged between the collaborating databases on a daily basis to achieve optimal synchrony. Webin is the preferred tool for individual submissions of nucleotide sequences, including Third Party Annotation, alignments and bulk data. Automated procedures are provided for submissions from large-scale sequencing projects and data from the European Patent Office. In 2006, the volume of data has continued to grow exponentially. Access to the data is provided via SRS, ftp and variety of other methods. Extensive external and internal cross-references enable users to search for related information across other databases and within the database. All available resources can be accessed via the EBI home page at http://www.ebi.ac.uk/. Changes over the past year include changes to the file format, further development of the EMBLCDS dataset and developments to the XML format.
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